用dpabi v2.3做静息态功能连接的几个问题

Submitted by bszzf2018 on

严老师好:

我最近在用dpabi 2.3版做静息态功能连接,预处理选择realign, T1 DICOM to NIFTI, T1 Coreg to Fun, Segment, Normalise, Smooth, Detrend, Nuisance Covariates Regression (Friston 24, WM, CSF, Global), Filter, Scrubbing(按默认参数), FC。我的疑问如下:

1. 这些处理步骤对于功能连接来说是否有缺失或多余?

2. 因为我目前只是想做功能连接,所以想问下scrubbing是否有必要做?

3. 如果要做scrubbing,是在Nuisance Covariates Regression这步选择Head motion scrubbing regressors(按默认参数),还是像我现在的处理一样,选择Filter之后的“Scrubbing”?

Analysis With GM Volume as Covariates

Submitted by jjtormur on

Dear experts,

I am trying to perform an ALFF analysis with dpabi. I want to introduce the GM volume as a covariate in the two-sample t-test.

I think that I have to introduce this covariate in "covariate images" option in the statistical analysis, but What kind of images should I use?

I have the segmented and dartel images for all subjects, but I don't know if these images are the correct ones.

Best,

Juan

 

black region in the bottom of image for ReHo

Submitted by kato7kato7 on

Dear experts 

I preprocessed dicom files from FunRaw to smoothed ReHo image by DPARSF. The whole process was error-free, but the bottom regions of the szReHo image including cerebellum and pons were shown  as  black. I think there was a problem with preprocessing, but I do not know exactly what the problem is. I attached files created during preprocessing. I would like to ask you for your expert advice. Thank you

p.p1 {margin: 0.0px 0.0px 16.8px 0.0px; font: 14.0px Georgia; color: #3b3b3b}

Question about ALFF analysis

Submitted by jjtormur on

Dear all,

I am trying to do some of ALFF and fALFF analysis in resting -state, but I don't know if I am proceeding well. I just want to compare the activity in resting-state beteween two groups. Similar to this paper from Wang, Human Brain Mapping 32:1720–1740 (2011).

I did all the pre-processing in SPM and now I want to use this images for ALFF. 

dpabi使用VBM出错

Submitted by mayhappy on
请各位老师帮忙看看,我用的metlab2014B,spm8,dpabi2.3,在运算VBM时出现如下提示:
 
警告: STR2FUNC "C:\Program
Files\MATLAB\R2014b\toolbox\dpabi_v2.3_170105\dparsf\Jobmats\Template_VBM_NewSegmentDARTEL.mat"
的输入不是有效的函数名称。在未来的版本中,这将生成错误。 
> In DPARSFA at 24
  In dpabi>pushbutton_VBM_Callback at 199
  In gui_mainfcn at 95
  In dpabi at 42
  In @(hObject,eventdata)dpabi('pushbutton_VBM_Callback',hObject,eventdata,guidata(hObject)) 
 
谢谢!!

Error Using Normalization

Submitted by RaviBot on
Forums

Hello, 

I am importing thresholded weighted, undirected matricies (symmetric) into GraphVar from an outside progam. These networks/matricies are all not fragmented (checked using the CheckFrag button). I am randomizing using the random_und_connected function however when I try to calculate cetain graph metrics such as betweenness centralitity, I get an error saying "Normalization error: some metrics derived from random networks result in zero which can not be used for normalization." 

Could someone please advise on what could be the issue? Thanks in advance!