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DPABISurfSlurm: High Performance Computing Version of DPABISurf
YAN Chao-Gan
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DPABISurfSlurm is a high performance computing version of DPABISurf! You can use it on High Performance Computing (HPC, or supercomputing) center. The only requirement is Singularity!
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DPARSFA数据说明
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DPARSFA大多数文件夹的组织方式为:工作路径\被试名\数据文件。
FunRaw:该文件夹下包含了所有被试扫描数据的DICOM文件。
FunImg:该文件夹下包含了所有被试的功能像NIFTI格式文件,一般情况下,这些文件由DPARSF中的“dcm2nii”功能自动生成。除非特别声明,以FunImg开头的文件夹下存储的都是NIFTI格式文件。
FunImgA:“A”表示时间层矫正。该文件夹下存储了去除前10个时间点并进行了时间层矫正的数据文件。
FunImgAR:“R”表示头动矫正。该文件夹下存储的是在FunImgA文件中数据的基础上进行了头动矫正后的数据文件。
FunImgARC:“C”表示噪声去除(不包括全局信号回归)。该文件夹下存储的是在FunImgAR文件中数据的基础上进行了噪声去除(不包括全局信号回归)后的数据文件。
FunImgARglobalC:“globalC”表示噪声去除(包括全局信号回归)。该文件夹下存储的是在FunImgAR文件中数据的基础上进行了噪声去除(包括全局信号回归)后的数据文件。
FunImgARCovs:存储了在噪声去除的过程中使用的线性回归模型中包含的协变量。
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DPABI/DPABISurf/DPARSF Error Handling
YAN Chao-Gan
Forums
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DPABI/DPABISurf/DPARSF Error Handling
(中文版在后半部分)
DPABISurf: A Surface-Based Resting-State fMRI Data Analysis Toolbox
- DPABI/DPABISurf/DPARSF Stand-Alone Version YAN Chao-Gan
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DPABI: a toolbox for Data Processing & Analysis for Brain Imaging
- The R-fMRI Course YAN Chao-Gan
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The R-fMRI Course V3.0 English Version
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Normaliztion check pictures
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Hi!
I am trying to conduct preprocessing of resting-state fMRI.
Among those steps, I can get "pictures for check normalization"
However, no matter how I reorient images, I couldn't get images that I think ideal.
This link shows images that I reoriented and the attained results after normalization.
https://ibb.co/Bz8VFM8
However, what I think to be ideal is this picture.
https://ibb.co/3rdgmbZ
How can I get it to be ideal images?
Thanks!