After you select the options on the GUI and save the mat file is it possible to run DPARSF from the command line?  The only machine I can run DPARSF that has the necessary Matlab toolboxes is on a linux cluster. I can easily submit jobs but am not permitted to run the GUI on the cluster.  I am hoping that once the mat file is set kicking off the Analysis (i.e pushing the Run button) could be accomplished from the command line.

Thanks for your help.

Bob

各位使用者大家好，

想請問若我使用rest來檢視我做完統計分析的結果，

  Good morning,

I am currently trying to preprocess my data currently and I have faced the same error a couple of times despite trying to debug this issue, any ideas?

best wishes

Dan

Dear Chao-Gan,

I am seeking a whole-brain template or mask which segments brain into a few (not too many, best <10) large-scale functional networks.

Hello!

I would like to perform scrubbing on my already preprocessed data. In the Power (2012) paper they say to do it after functional connectivity has been done. Is that possible in DPRSFA? If yes, how should I do it? What is the starting directory name in the toolbox?

Thank you for your help,

Emilia Cheladze

Dear prof YAN

the Cluster Connectivity Criterion could be chosen among 6 voxels (surface), 18 voxels (edge) or 26 voxels (corner) according to rmm value.

what different between three type of criterion, and which is the best?

Hi, I am receiving the following error trying to complete standardization: 

??? Out of memory. Type HELP MEMORY for your options.

Error in ==> var at 87
    y = sum(abs(x).^2, dim) ./ denom; % abs guarantees a real result

Error in ==> std at 32
y = sqrt(var(varargin{:}));

Error in ==> y_Standardization at 84
Std_AllSub = std(AllVolume)';

大家好：我想请教一个问题

我用相同版本的DPARSFA预处理了一批数据（两组人），再用相同参数重复处理后，做双样本T检验比较差异脑区，发现peakMNI  cluster size 和peak intensity 并不相同，例如第一次处理时，insula的peak点在 27  21  -6，cluster size是28，  peak intensity是4.2101。第二次处理时，insula 的peak 点在 +39+9—3，cluster size 是52，peak intensity 是4.6545。大家有没有遇到过类似的问题呢？求解答，谢谢~

Dear experts,

    Recently I just tried using the DPARSF v4.1 to preprocess my resting fmri data, but somehow always could not finish it, reminding the mistake in time point when maybe last step to normalize. Strange thing is I specially checked all the data, there is no wrong in FunRaw. So I am totally confused. Below I showed some screenshots with the template parameters I set and some details of the mistake that Matlab warned.

Best regards,

Xin

Dear all,

最近关于cluster level的校正问题讨论的非常热烈，Eklund组的PNAS文章在世界范围内产生了非常大的反响（很多审稿人已经再问这个问题），SPM组和AFNI组也相继发表了回复文章。看完这些文章，我也有一些疑惑，希望严师兄及圈内人士帮我解惑下：