Run DPARSF from command line

Submitted by bkraft4257 on

After you select the options on the GUI and save the mat file is it possible to run DPARSF from the command line?  The only machine I can run DPARSF that has the necessary Matlab toolboxes is on a linux cluster. I can easily submit jobs but am not permitted to run the GUI on the cluster.  I am hoping that once the mat file is set kicking off the Analysis (i.e pushing the Run button) could be accomplished from the command line.

Thanks for your help.

Bob

P.S. I am a new user to DPARSF but so far I am finding it to be a very useful tool. Thank you for making it available to everyone.

YAN Chao-Gan

Sat, 09/17/2016 - 03:00

Hi Bob,

You can save the configurations to XXX.mat.

And then 

DPARSFA_run('XXX.mat');

Best,

Chao-Gan

 

bkraft4257

Sat, 09/17/2016 - 03:10

In reply to by YAN Chao-Gan

Perfect. Thank you Sent from my iPhone On Sep 16, 2016, at 11:01 PM, The R-fMRI Network > wrote: [To post a comment, please reply to rfmri.org@gmail.com ABOVE this line] Commented by YAN Chao-Gan (YAN Chao-Gan) Hi Bob, You can save the configurations to XXX.mat. And then DPARSFA_run('XXX.mat'); Best, Chao-Gan Online version of this post: http://rfmri.org/comment/4542#comment-4542