DPABI/DPABISurf/DPARSF

scrubbing after functional connectivity

Submitted by Emilia Cheladze on

Hello!

I would like to perform scrubbing on my already preprocessed data. In the Power (2012) paper they say to do it after functional connectivity has been done. Is that possible in DPRSFA? If yes, how should I do it? What is the starting directory name in the toolbox?

Thank you for your help,

Emilia Cheladze

Memory Error

Submitted by bmalivoire on

Hi, I am receiving the following error trying to complete standardization: 

??? Out of memory. Type HELP MEMORY for your options.

Error in ==> var at 87
    y = sum(abs(x).^2, dim) ./ denom; % abs guarantees a real result

Error in ==> std at 32
y = sqrt(var(varargin{:}));

Error in ==> y_Standardization at 84
Std_AllSub = std(AllVolume)';

Did not know what happend

Submitted by Spiral on

Dear experts,

    Recently I just tried using the DPARSF v4.1 to preprocess my resting fmri data, but somehow always could not finish it, reminding the mistake in time point when maybe last step to normalize. Strange thing is I specially checked all the data, there is no wrong in FunRaw. So I am totally confused. Below I showed some screenshots with the template parameters I set and some details of the mistake that Matlab warned.

Best regards,

Xin

How can I extract grey matter voxel signal?

Submitted by Eunji Jun on

Hi, I have 2 questions.

First, How can I extract only grey matter voxel signal?

I extracted 116 ROI region signal applied by AAL mask, but I need voxel-wise information.

I knew that functional information comes from grey matter, so I'm gonna extract all voxel signals in grey matter.

 

Second, I don't know how I can start the point where I have done processing so that I shouldn't do again what I had done.

I tried to uncheck the menu which I have done, but I don't know how I can write 'starting working directory'.