Hi!
firstly I would like to thank you for these great tools.
my issue:
Using DPARSF "Coreg T1 to Func" is computed without errors but then the result is not saved in T1ImgCoreg.
Only the result of "crop T1" is saved correctly.
I tried to do the the same elaboration with SPM8 and the resulting coregistered file is correctly saved.
Looks like it's missing a call to a write-file routine around line 1096 in DPARSF_run. Or I am missing something?
I'm using: DPARSF_V2.2_121225.
regards
orsolini
Forums
Re: issue saving result "Coreg T1 to Func"
Best,
Chao-Gan
Re: issue saving result "Coreg T1 to Func"
I'm not considering this a correction, just something useful to me, don't know if this would be of any utility for other.
I'm pulling workarounds for my issues on GitHub, I'd love to give my small contribution to your project.
kind regards
Orsolini
Re: issue saving result "Coreg T1 to Func"
Thanks a lot for your contribution, your efforts will make this work better!
Regarding to estimate or estwrite, this is not a bug but an intended design. DPARSF coregisters the T1 image to the functional image WITHOUT reslice. However, the orientation of the T1 image is aligned with functional data since a rigid-body coregistration is performed here and the information is stored in the header of T1 image. There is no need to reslice the T1 image in a resolution of functional images (from 1*1*1 to 3*3*3 typically). If you have a special need, you may use estimate and write.
In addition, thanks you revision for the bug in creating mean functional image for 4D files.
Best,
Chao-Gan