DPABI/DPABISurf/DPARSF

ERROR IN DPABISurf: Repetition time did not match between the scan's header and the associated JSON metadata file.

Submitted by Zeqiang Linli on

Dear Dr. Yan

I encountered an error when I ran my data (not have DICOM data, start with FunImg and T1Img) by using DpabiSurf. The data have passed the data organization checcking and successfully converted into BIDS. But, the error was reported during the “Preprocessing with fmriprep” stage for every subject. The error log is the following figure. Since this is not DICOM data, I manually entered TR=2 (but I confirm that this is correct). I confirmed that I have correctly installed the DpbaiSurf as I have successfully run the DemoData (start from FunRaw) posted on this website.

ROI definition for measuring functional connectivity

Submitted by tara.fd on

Hi everyone, 

In a hole-brain study, I need to measure the functional connectivity and I need the results based on the Schaefer atlas. There is not any specific region of interest, then what should I choose in the "Define ROI" box?

I try to choose Schaefer from my system but it doesn't show the file in the folder.

I'll appreciate if you could help me,

Tara

预处理过程报错求助

Submitted by doctorsu on

严老师,您好,我在处理静息态功能核磁数据时出现这样的报错,想请教您
Moving Slice Timing Corrected Files:sub001pro OK
{'Error in Slice Timing, time point number doesn't match: sub001pro'}

错误使用 copyfile
未找到匹配的文件。

出错 DPARSFA_RerunWithGSR (line 89)
copyfile([Cfg.DataProcessDir,filesep,FunSessionPrefixSet{iFunSession},StartingDirName],[Cfg.DataProcessDir,filesep,FunSessionPrefixSet{iFunSession},StartingDirName,'global']);