Working Directory is a common concept within DPARSF.
In DPARSF, Working Directory means the upper directory of FunRaw/T1Raw/FunImg/T1Img etc. All the results will be generated under the Working Directory.
The data organization under the working directory should be:
The subject list under T1Raw should be exactly the same as those under FunRaw. Please pay attention if there is any space after subject name, e.g., Sub_001 and Sub_001spacespace, will cause an error in data processing.