Dear
I am getting the following error after trying to run realignment on DPARSF A:
Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in MATLAB command window, starting with the lines (look
for the line showing the exact #job as displayed in this error message)
------------------
Running job #1
------------------
Error in spm_jobman (line 217)
Error in DPARSFA_run>(parfor body) (line 766)
Error in DPARSFA_run (line 725)
parfor i=1:AutoDataProcessParameter.SubjectNum
Error in DPARSFA>pushbuttonRun_Callback (line 1779)
[Error]=DPARSFA_run(handles.Cfg);
Error in gui_mainfcn (line 95)
feval(varargin{:});
Error in DPARSFA (line 30)
gui_mainfcn(gui_State, varargin{:});
Error while evaluating uicontrol Callback
Any help would be appreciated.
Thanks you in advance.
Forums
how to continue dpabi pipeline
Dear Chaogan,
I only selected to run realign, voxel-specific head motion correction, and automask preprocessing steps in dpabi. However, due to data error in some subjects, I had to restart the program and run the rest of subjects for several times. Because of the pipeline breaks, only the subjects who were run in the last round had generated Masks, FunImgR and Realignparameter folders, and only the last subject had a Voxelspecificheadmotion folder. All subjects had generated rp*.txt, r*.nii, mean*.nii, *.mat files in the FunImg folder. I have a relatively large number of subjects, is it possible to continue the realign, voxel-specific head motion correction, and automask steps for those subjects who didn't generate Masks, FunImgR and Realign folders, without deleting the rp*.txt, r*.nii, mean*.nii, *.mat files in the FunImg folder? Currently, due to multiple *.nii files in FunImg folder, the program doesn't know which one to pick. Would appreciate very much for your help. Thank you.
-Lihong
Hi Lihong,
Hi Lihong,
I suggest you redo realign, cause this only consumes computer time.
Or you have to create a subject list for those who didn't finish realign. Then realign only for these subjects. And then continue with the following steps for all the subjects.
DPABI->The R-fMRI Maps Project->Organize Intermediate Files would be a nice choice to save the key intermediate files.
Best,
CHao-Gan