Dear experts,
I got some problems with Rest 1.8 while doing statistics for fALff. mfAllf-1 files are generated by Rest strictly following the course video.
1. About mask: If I leave the mask option empty, does it mean that Rest will run the default mask or whole brain? Is there any default mask in Rest programme that I can use?
2. I use DMN mask created by Pickatlas. This mask was tested in SPM before for statistics analysis and it worked well. But when I put it into Rest, It comes back with errors.
Read 3D EPI functional images: "N:\test1\mfALFF-1"...
Image Files in the Group:
mfALFF-100001.nii
mfALFF-100002.nii
mfALFF-100003.nii
mfALFF-100004.nii
mfALFF-100005.nii
mfALFF-100006.nii
mfALFF-100007.nii
mfALFF-100008.nii
mfALFF-100009.nii
mfALFF-100010.nii
mfALFF-100011.nii
mfALFF-100012.nii
One Sample T Test Calculating...
Array dimensions must match for binary array op.
Error in rest_ttest1_Image (line 49)
TTest1_T=TTest1_T.*MaskData;
Error in rest_ttest1_gui>btnCompute_Callback (line 130)
rest_ttest1_Image(DependentDirs,OutputName,MaskFile,Base);
Error in gui_mainfcn (line 95)
feval(varargin{:});
Error in rest_ttest1_gui (line 27)
gui_mainfcn(gui_State, varargin{:});
Error while evaluating uicontrol Callback
Could you help me with these two problems? Thank you very much in advance.
Best regards,
Wei
Hi Wei,
Hi Wei,
1. If you left it empty, is means whole brain. You can use BrainMask_05_61x73x61.img.
2. You have to resample the DMN mask to the resolution of your functional images. You can use image reslicer.
Best,
Chao-Gan