Hi, Chao-gan
I found that the DPARSF AND DPARSFA have some error with the nuisance covariates regression. The errors are as follows:
Extracting ROI signals...
Reading images from "D:\lq\New_folder\mmt\test\FunImgAR\mmt001\rara20121005_151629HEROINGONOGOCRAVING4RESQIUYAOPINGs004a1001.nii" etc.
Error using y_ExtractROISignal (line 187)
File doesn't exist or wrong ROI definition, please check:
D:\lq\New_folder\mmt\test\Masks\WarpedMasks\mmt001_WhiteMask_09_91x109x91.nii.
Error in DPARSFA_run>(parfor body) (line 2516)
y_ExtractROISignal([AutoDataProcessParameter.DataProcessDir,filesep,FunSessionPrefixSet{iFunSession},AutoDataProcessParameter.StartingDirName,filesep,AutoDataProcessParameter.SubjectI
Error in DPARSFA_run (line 2371)
parfor i=1:AutoDataProcessParameter.SubjectNum
Error in DPARSFA>pushbuttonRun_Callback (line 1670)
[Error]=DPARSFA_run(handles.Cfg);
Error in gui_mainfcn (line 96)
feval(varargin{:});
Error in DPARSFA (line 30)
gui_mainfcn(gui_State, varargin{:});
Caused by:
Error using y_ExtractROISignal (line 187)
File doesn't exist or wrong ROI definition, please check:
D:\lq\New_folder\mmt\test\Masks\WarpedMasks\mmt001_WhiteMask_09_91x109x91.nii.
Error while evaluating uicontrol Callback
I also attacted the parameters of the DPARSFA.
Is there somthing wrong? I tried many times and the errors always exist. I don't know why. Can you tell me why? Thanks.
Best
Qiang
| Attachment | Size |
|---|---|
| parameters of DPARSFA | 345.57 KB |
| parameters1 of DPARSFA | 76.93 KB |
Forums
Hi,
Hi,
You can check if D:\lq\New_folder\mmt\test\Masks\WarpedMasks\mmt001_WhiteMask_09_91x109x91.nii exist.
I guess you are processing rat data? Then the human mask should not work.
Best,
Chao-Gan
It's the error with human data
Hi, Chao-gan
Actually, this is the error with human data. Also, I checked the "mmt001_WhtiteMask_09_91x109x91.nii" does not exist. The direction of WarpedMask is blank. I don't know why. In fact, I test it many times with different version of DPARSFA. This error still exist. I wonder if there is some bugs.
Best
Qiang
Maybe post your settings here
Maybe post your settings here will be helpful.
Best,
Chao-Gan
My settings of DPARSFA IN DPABI
Hi, Chao-gan
The steps before the error reports is rutine steps: 1 slicetiming, 2 realign, 3 normalization (normalized directly to the SPM EPI template) and 4 smooth. Then the nuisance covariates regression was done.
The snap pictures of my settings of DPARSFA in DPABI were attached. The following is the error reports:
Hi Qiang,
Hi Qiang,
As Lei pointed out, nuisance regression should be put after Normalization if you don't have T1 images (using EPI template for normalization), as you will see in DPARSF Basic edition.
Best,
Chao-Gan
Thanks a lot!
Hi, Chao-gan
Thank you very much!
Best
Qiang