Dear DPARSF experts,
I have successfully used DPARSFA in the past and found it to be very
useful. I've encountered problems running a preprocessing job on 57
subjects. I grouped the T1 *.dcm subjects in T1Raw and the fMRI *.dcm
subjects in FunRaw. I obtained folders FunImg and T1Img before the program
crashed with the following messages:
Slice Timing Setup:NC019 OKSlice Timing Setup:NC024 OKSlice Timing
Setup:NC028 OKSlice Timing Setup:NC031 OKSlice Timing Setup:NC032 OKSlice
Timing Setup:NC034 OKSlice Timing Setup:NC036 OKSlice Timing Setup:NC039
OKSlice Timing Setup:NC040 OKSlice Timing Setup:NC041 OKSlice Timing
Setup:NC060 OKSlice Timing Setup:NC062 OKSlice Timing Setup:NC070 OKSlice
Timing Setup:NC073 OKSlice Timing Setup:NC074 OKSlice Timing Setup:NC077
OKSlice Timing Setup:NC086 OKSlice Timing Setup:NC103 OKSlice Timing
Setup:NC109 OKSlice Timing Setup:NC118 OKSlice Timing Setup:NC119 OKSlice
Timing Setup:NC121 OKSlice Timing Setup:NC122 OKSlice Timing Setup:NC123
OKSlice Timing Setup:NC124 OKSlice Timing Setup:NC128 OKSlice Timing
Setup:NC149 OKSlice Timing Setup:NC170 OKSlice Timing Setup:NY069 OKSlice
Timing Setup:NY242 OKSlice Timing Setup:NY244 OKSlice Timing Setup:NY255
OKSlice Timing Setup:NY256 OKSlice Timing Setup:NY258 OKSlice Timing
Setup:NY262 OKSlice Timing Setup:NY266 OKSlice Timing Setup:NY273 OKSlice
Timing Setup:NY276 OKSlice Timing Setup:NY297 OKSlice Timing Setup:NY298
OKSlice Timing Setup:NY299 OKSlice Timing Setup:NY311 OKSlice Timing
Setup:NY312 OKSlice Timing Setup:NY313 OKSlice Timing Setup:NY317 OKSlice
Timing Setup:NY326 OKSlice Timing Setup:NY338 OKSlice Timing Setup:NY339
OKSlice Timing Setup:NY342 OKSlice Timing Setup:NY343 OKSlice Timing
Setup:NY347 OKSlice Timing Setup:NY349 OKSlice Timing Setup:NY360 OKSlice
Timing Setup:NY362 OKSlice Timing Setup:NY363 OKSlice Timing Setup:NY368
OKSlice Timing Setup:NY371 OKSlice Timing Setup:NY382 OK
Warning: Run spm_jobman('initcfg'); beforehand
> In spm_jobman at 107
In DPARSFA_run at 393
------------------------------------------------------------------------
Running job #1
------------------------------------------------------------------------
Running 'Slice Timing'
SPM8: spm_slice_timing (v3756) 17:35:27 - 09/04/2014
========================================================================
Your TR is 2.4
Failed 'Slice Timing'
Improper assignment with rectangular empty matrix.
In file
"/home/faa2016/Documents/MATLAB/myToolboxes/spm8/spm_slice_timing.m"
(v3756), function "spm_slice_timing" at line 232.
In file
"/home/faa2016/Documents/MATLAB/myToolboxes/spm8/config/spm_run_st.m"
(v2312), function "spm_run_st" at line 25.
The following modules did not run:
Failed: Slice Timing
Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in
MATLAB command window, starting with the lines (look for the line
showing the exact #job as displayed in this error message)
------------------
Running job #1
------------------
Error in spm_jobman (line 217)
Error in DPARSFA_run (line 394)
Any help will be most appreciated.
--
Farras Abdelnour
farras.abdelnour@gmail.com
http://sacklerinstitute.academia.edu/FarrasAbdelnour
Hi Farras,
Hi Farras,
That's a "warning" but not an "error". If it crashed, could you paste the error message (in red color) here?
Best,
Chao-Gan