/bin/sh: 1: /opt/conda/bin/fmriprep: not found
I tried to preprocess brain imaging data from a GE scanner on a PC running Windows 11, and I get the following warning info:
I tried to preprocess brain imaging data from a GE scanner on a PC running Windows 11, and I get the following warning info:
Dear all, I'm using DPABI and REST plus software for my research project.
I have a couple of question regarding the software:
Which kind of FDR correction is used in DPABI in viewer part (one tailed or two tailed)? The cluster report for REST plus and DPBI under the same statistical analysis conditions are not the same. would you please guide me ?
Is it necessary to choose mask in statistical analysis ?
DPARSFA and DAPBISurf are two “pipelines,” meaning they consist of several steps. After encountering a bug during preprocessing, it would be handy to continue the preprocessing from the step where it was halted. DPARSFA/DPABISurf does preprocessing from left to right and top to bottom on GUI. So, continuing preprocessing contains the following steps:
1) Close the halted DPARSFA/DPABI GUI;
严老师好,各位老师好,我在使用DPARSFA对4D nii数据进行预处理时没有生成全局信号回归的结果,自己排查的时候也不知道问题在哪,希望能得到老师们解答。
MATLAB版本是2021a。以下附上当时DPARSFA的设定和报错
ln: Media/data3/FunImgARWSglobal: No such file or directory
> ver>locGetSingleToolboxInfo (行 283) 内
ver (行 56) 内
DPARSFA_run (行 1665) 内
DPARSFA_RerunWithGSR (行 100) 内
DPARSFA 内
gui_mainfcn (行 95) 内
DPARSFA 内
索引超出数组元素的数目(0)
Hi Prof. Yan,
尊敬的严超赣老师:
您好!感谢您百忙之中阅读我的技术问题。我安装DPABI无论哪一个版本总是会报错,也找不到原因。目前我已将MatLab从2023版换到2019版,SPM12,DPABI换过2.3和8.1,都不能运行DPABI。具体在MATLAB中点击DPARSF4.3 Advanced Edition后就有如下报错示意图。我想问问老师,到底要安装哪些版本才能运行DPABI呢?我电脑的型号是:Window11,64位系统,联想。
祝老师生活愉快!工作顺顺利利!
学生:陈冉
2024年2月29日
I would like to ask why the error "Error using y_ReadAll
Index exceeds the number of array elements. Index must not exceed 0.
Error in y_ExtractROISignal (line 61)
[AllVolume,VoxelSize,theImgFileList, Header] =y_ReadAll(AllVolume);" has popped up.
According to the MATLab window, DPARSF has completed deformation, when it suddenly encountered this error message. I tried to re-run DPARSF after DARTEL segmentation (as show in the error GUI image), but the same error has popped up. I have no idea what I could do to solve this error.
I ran dpabi on my data and when performing QC I noticed errors in registration in many of the subjects (see picture attached).
How do I address this error?
Thanks
严老师您好,非常感谢您和团队为方便好用的软件付出的努力,之前也一直在用dpabi处理人类的数据,现在我需要对猴子的数据进行处理,在使用dpabi的DPARSF for Monkey Data功能进行预处理时,我遇到了一些问题。
考虑到数据扫描方向与模板方向不同,我进行了如下操作:
1、使用DPABISF先将功能像和结构像的dicom文件转为nifty文件,每个被试FunImg内有一个nifty文件和一个json文件,每个结构像内有一个json文件,两个nifty文件(其中一个是crop的文件)
2、使用mricrogl中的reorient功能将每个被试的一个功能像nifty文件与两个结构像的nifty文件进行方向调整,使其与内置模板方向一致(这次扫描的方向有些奇怪,需要变换y轴和z轴,并将y轴翻转,在DPABISF的reorient功能里我目前没有学会如何调整,所以采取其他软件实现)