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  • 图像由Talairach空间怎么变换到MNI空间

    Submitted by 06170323 on
    Forums
    各位论坛版主 你们好! 请教你们一个图像空间变换的问题,我现在有一批数据,这批数据都是Talairach空间下的,而我现在想把AAL模板用到这组数据上,所以要对这批数据做一个空间变换,把它们由Talairach空间变到MNI空间。我查了很多坐标变换的软件,都只能对你输入的坐标做一个变换,而我现在要变换是整个图像数据,请教下你们用什么软件可以实现?REST可以做吗?打扰你们了,非常感谢!!
  • 用dparsf时报错

    Submitted by 287391600 on
    Forums
    老师: 在用dparsf做处理时总是报如下错误: Moving Normalized Files:sub001 OK??? Error using ==> copyfile No matching files were found. Error in ==> DPARSF_run at 551 copyfile('*.ps',['..',filesep,'RealignParameter',filesep]); Error in ==> DPARSF>pushbuttonRun_Callback at 935 [Error]=DPARSF_run(handles.Cfg); Error in ==> gui_mainfcn at 96 feval(varargin{:});
  • 学术报告信息

    Submitted by ZangYF on
    Forums
    学术报告 1. 认知障碍的影像学检查 报告人:首都医科大学宣武医院神经内科 韩璎 博士 2. 社会老年人神经心理学测查与脑结构磁共振研究 报告人:School of Psychiatry, University of New South Wales,张浩波 博士研究生 时间:2011年10月22日9:00 地点:杭州师范大学附属医院七号楼二楼读片室 主持人:杭州师范大学认知与脑疾病研究中心 臧玉峰 教授 欢迎光临!
  • REST doesn't support the selected ROI definition now

    Submitted by homerzeng on
    Forums
    When i try to load a predefined ROI for seed based connectivity analysis, i get the following error: ??? Error using ==> rest_misc>ViewROI at 304 REST doesn't support the selected ROI definition now, Please check: /mnt/vpgroup/Greicius_ROI/dorsal_DMN/04/4.nii Error in ==> rest_misc at 196 ViewROI(AROIDef); Error in ==> rest_SetROI at 166 rest_misc( 'ViewROI',
  • Dealing with 2 sessions and use of mask

    Submitted by lena123 on
    Forums
    I am doing a seed region analysis for the entire n-back acquisition in two groups of subjects. I intend to finally compare the groups for differences. 1. Each subject had 2 sessions of n-back runs. I am able to get the seed region based FC maps and Z maps for each session separately. But how can I get a single contrast file from the 2 sessions for each subject?
  • 关于rest的correlation analysis

    Submitted by liufeng on
    Forums
    管理员好! 最近我们尝试用rest的correlation analysis做量表与reho全脑的相关分析,想看下哪个脑区和量表相关比较显著。然后因为spm中的multiple regression也可以做全脑与量表算相关,又用spm算了下。 我们算的时候将年龄、性别等作为了协变量。 1、可是当我们做完发现,rest的结果和spm的结果基本上不一致,区域差别很明显。就是说基本上没有重叠的脑区,而且存在某个重叠的脑区在rest里是正相关、spm中是负相关。我们研究了好久,还是没有找出原因。只知道rest是用partialcorr做的去协变量。spm是用regress去的协变量。其实partialcorr里面也是用到了回归。我们就是想问下,为什么两个软件做的都是同一件事情可是得到的结果为什么差异这么明显呢?那么哪个结果做出来的比较真实客观呢?
  • 关于alphasim的一些问题

    Submitted by liufeng on
    Forums
    不好意思,网速终于快一点了,我还是在这里提问下吧。谢谢管理员的解答。 今天研究了下alphasim,发现有些地方不是太懂。以下是我用全脑mask跑的alphasim。 Mask filename = BrainMask_05_61x73x61 Voxels in mask = 70831 Gaussian filter width (FWHM, in mm) = 8.000 Cluster connection radius: rmm = 5.00 Individual voxel threshold probability = 0.001 Number of Monte Carlo simulations = 1000 Output filename = AlphaSimtext0.0018
  • A new research: large-scale brain functional and structural networks were disrupted in idiopathic generalized epilepsy

    Submitted by jigongjun on
    Forums
    Brain. 2011 Oct;134(Pt 10):2912-28. Altered functional-structural coupling of large-scale brain networks in idiopathic generalized epilepsy. Zhang Z, Liao W, Chen H, Mantini D, Ding JR, Xu Q, Wang Z, Yuan C, Chen G, Jiao Q, Lu G. Source
  • ALFF计算和预处理的问题

    Submitted by y.kong on
    Forums
    有个比较弱的问题,刚没想明白,来问一下专家。 我用FSL写了个SCRIPT做ALFF,不过对ALFF有个问题。FSL对raw data做预处理的时候,会把图像的中间值global normalize到10000左右 - the whole 4D data set is normalised by a single scaling factor ("grand mean scaling") 。这样到higher level的统计才正确。但是这样的问题是每个SUBJECT SCALE FACTOR不同,再进行FFT计算ALFF的时候,会对结果有所影响。那在REST里面怎么处理normalisation的问题的? 谢谢