y_Call_spm_orthviews Error (DPARSFA 3.1)

Submitted by sharky on

Dear Colleagues,

I keep getting this error while running my pipeline:

...

Normalization by using DARTEL:P15 OK
Moving Normalized Files:P10 OKMoving Normalized Files:P09 OKMoving Normalized Files:P08 OKMoving Normalized Files:P07 OKMoving Normalized Files:P06 OKMoving Normalized Files:P05 OKMoving Normalized Files:P04 OKMoving Normalized Files:P03 OKMoving Normalized Files:P02 OKMoving Normalized Files:P01 OKMoving Normalized Files:P15 OKMoving Normalized Files:P14 OKMoving Normalized Files:P13 OKMoving Normalized Files:P12 OKMoving Normalized Files:P11 OK
 
Moving Normalized Files:P10 OKMoving Normalized Files:P09 OKMoving Normalized Files:P08 OKMoving Normalized Files:P07 OKMoving Normalized Files:P06 OKMoving Normalized Files:P05 OKMoving Normalized Files:P04 OKMoving Normalized Files:P03 OKMoving Normalized Files:P02 OKMoving Normalized Files:P01 OKMoving Normalized Files:P15 OKMoving Normalized Files:P14 OKMoving Normalized Files:P13 OKMoving Normalized Files:P12 OKMoving Normalized Files:P11 OK
 
Undefined function 'y_Call_spm_orthviews' for input arguments of type 'char'.
 
Error in DPARSFA_run (line 2762)
        H = y_Call_spm_orthviews(Ch2Filename,0,0,0,18,Filename,jet(64),0,250,H,0.8);
 
Error in DPARSFA>pushbuttonRun_Callback (line 1670)
    [Error]=DPARSFA_run(handles.Cfg);
 
Error in gui_mainfcn (line 96)
        feval(varargin{:});
 
Error in DPARSFA (line 30)
    gui_mainfcn(gui_State, varargin{:});
 
Error while evaluating uicontrol Callback

Everything seems to run smoothly before the normalization step...  'PicturesForChkNormalization' folder is empty.

Any thoughts?

===

Best Wishes,

Alex

 

YAN Chao-Gan

Mon, 02/16/2015 - 20:20

Permalink

Hi Alex,
Please add with subfolders for DPABI and SPM8 in matlab. This problem will be solved.

Best,

Chao-Gan


On Mon, Feb 16, 2015 at 8:47 AM, The R-fMRI Network <rfmri.org@gmail.com> wrote:
[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]

By Alex (sharky)

Dear Colleagues,

I keep getting this error while running my pipeline:

...

Normalization by using DARTEL:P15 OK
Moving Normalized Files:P10 OKMoving Normalized Files:P09 OKMoving Normalized Files:P08 OKMoving Normalized Files:P07 OKMoving Normalized Files:P06 OKMoving Normalized Files:P05 OKMoving Normalized Files:P04 OKMoving Normalized Files:P03 OKMoving Normalized Files:P02 OKMoving Normalized Files:P01 OKMoving Normalized Files:P15 OKMoving Normalized Files:P14 OKMoving Normalized Files:P13 OKMoving Normalized Files:P12 OKMoving Normalized Files:P11 OK
 
Moving Normalized Files:P10 OKMoving Normalized Files:P09 OKMoving Normalized Files:P08 OKMoving Normalized Files:P07 OKMoving Normalized Files:P06 OKMoving Normalized Files:P05 OKMoving Normalized Files:P04 OKMoving Normalized Files:P03 OKMoving Normalized Files:P02 OKMoving Normalized Files:P01 OKMoving Normalized Files:P15 OKMoving Normalized Files:P14 OKMoving Normalized Files:P13 OKMoving Normalized Files:P12 OKMoving Normalized Files:P11 OK
 
Undefined function 'y_Call_spm_orthviews' for input arguments of type 'char'.
 
Error in DPARSFA_run (line 2762)
        H = y_Call_spm_orthviews(Ch2Filename,0,0,0,18,Filename,jet(64),0,250,H,0.8);
 
Error in DPARSFA>pushbuttonRun_Callback (line 1670)
    [Error]=DPARSFA_run(handles.Cfg);
 
Error in gui_mainfcn (line 96)
        feval(varargin{:});
 
Error in DPARSFA (line 30)
    gui_mainfcn(gui_State, varargin{:});
 
Error while evaluating uicontrol Callback

Everything seems to run smoothly before the normalization step...  'PicturesForChkNormalization' folder is empty.

Any thoughts?

===

Best Wishes,

Alex

 


Online version of this post: http://www.rfmri.org/content/ycallspmorthviews-error-dparsfa-31


Many a little makes a mickle -- your kind contributions shall make our efforts not perish from the earth. Please help The R-fMRI Network at http://rfmri.org/#overlay=HelpUs
To manage subscriptions, please visit: http://rnet.co/mailman/listinfo/rfmri.org_rnet.co
Mail comment ID: http://www.rfmri.org/mailcomment/redirect/%3C31.1948.0.1424094468.bd6cd7dcfb0b9a9b7985cbcfefcf3499%40www.rfmri.org%3E

Hi!

Sure, that's the first thing I've done...

I have just re-installed/re-set everything... Here's the error I'm getting now:

Error using subsindex
Function 'subsindex' is not defined for values of class 'matlab.ui.Figure'.
 
Error in y_Call_spm_orthviews (line 49)
    st{curfig}.fig=H;
 
Error in DPARSFA_run (line 2762)
        H = y_Call_spm_orthviews(Ch2Filename,0,0,0,18,Filename,jet(64),0,250,H,0.8);
 
 
Error in DPARSFA>pushbuttonRun_Callback (line 1670)
    [Error]=DPARSFA_run(handles.Cfg);
 
 
Error in gui_mainfcn (line 95)
        feval(varargin{:});
 
Error in DPARSFA (line 30)
    gui_mainfcn(gui_State, varargin{:});
 
 
Error while evaluating UIControl Callback

Of note, normalization step seems to be completed sucessfully (there are nii-files in FunImgARCW).

===

Best,

Alex

YAN Chao-Gan

Tue, 02/17/2015 - 14:20

Permalink

Hi Alex,
This problem is caused by MATLAB 2014b. Since MATLAB 2014b, the kernel of GUI system is changed, thus MATLAB 2014b is not compatible with previous versions.

Please try to use MATLAB 2014a or earlier versions. We will try to make it 2014b compatible in the future.

Best,

Chao-Gan


On Tue, Feb 17, 2015 at 7:31 AM, The R-fMRI Network <rfmri.org@gmail.com> wrote:
[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]

Commented by Alex (sharky)

Hi!

Sure, that's the first thing I've done...

I have just re-installed/re-set everything... Here's the error I'm getting now:

Error using subsindex
Function 'subsindex' is not defined for values of class 'matlab.ui.Figure'.
 
Error in y_Call_spm_orthviews (line 49)
    st{curfig}.fig=H;
 
Error in DPARSFA_run (line 2762)
        H = y_Call_spm_orthviews(Ch2Filename,0,0,0,18,Filename,jet(64),0,250,H,0.8);
 
 
Error in DPARSFA>pushbuttonRun_Callback (line 1670)
    [Error]=DPARSFA_run(handles.Cfg);
 
 
Error in gui_mainfcn (line 95)
        feval(varargin{:});
 
Error in DPARSFA (line 30)
    gui_mainfcn(gui_State, varargin{:});
 
 
Error while evaluating UIControl Callback

Of note, normalization step seems to be completed sucessfully (there are nii-files in FunImgARCW).

===

Best,

Alex


Online version of this post: http://www.rfmri.org/comment/3525#comment-3525


Many a little makes a mickle -- your kind contributions shall make our efforts not perish from the earth. Please help The R-fMRI Network at http://rfmri.org/#overlay=HelpUs
To manage subscriptions, please visit: http://rnet.co/mailman/listinfo/rfmri.org_rnet.co
Mail comment ID: http://www.rfmri.org/mailcomment/redirect/%3C31.1948.3525.1424176264.631e30c28a8b6c01937033aea406aadf%40www.rfmri.org%3E

Dear Yan,

The kernel problem still exists? Because the same problem here, using the last version of dpabi and r2015b. (all added as subfolders...) so i decided to avoid the use 091001 modification in order to run once the analysis from start to end.

 

Anyway, once again thank you so much for your incredible software, which helps us a lot!

 

Best. 

 

 

Hi,

DPABI V2.0 is compatible with MATLAB 2015.

Best,

Chao-Gan

Forums
DPABI/DPABISurf/DPARSF