T1 to Fun coregistration problem (Error using DPARSFA_run>(parfor body) (line 1477)

Submitted by Lisa_Kr on
Hello,
 
I just don't understand why DPARSFA stops at the coregistration step with this error:
 
Error using DPARSFA_run>(parfor body) (line 1477)
cp: /path/c*.nii: No such file or directory
Error in DPARSFA_run (line 1462)
    parfor i=1:AutoDataProcessParameter.SubjectNum
 
Error in DPARSFA>pushbuttonRun_Callback (line 1761)
    [Error]=DPARSFA_run(handles.Cfg);
 
Error in gui_mainfcn (line 95)
        feval(varargin{:});
Error in DPARSFA (line 30)
    gui_mainfcn(gui_State, varargin{:});
 
Error while evaluating UIControl Callback
 
 
As I recall from previous analyses, the c*T1 file appears after the step is completed. What is the issue here?
 
Thanks!
 

Hi,

I finished all the preprocessing step for RAT resting state without any error message. 


when Im checking Quality control of my data  :

Im overlaying  functional images on their structural image after co registration and normalization....its seems perfectly overlap


But  when Im overlapping my functional and structural images  with template that is provided in the template folder thee are not perfectly overlap.


do you know what might be the error ? just to let you know that i have resize my voxel by factor of 10 at the beginning 


Thank you for your kind help 



Best wishes
-----
Marouane
http://michael-meaney.lab.mcgill.ca/
1472744841794_twitter.png

From: RFMRI.ORG <rfmri.org-bounces@rnet.co> on behalf of The R-fMRI Network <rfmri.org@gmail.com>
Sent: Wednesday, October 12, 2016 10:06:59 AM
To: rfmri.org@rnet.co
Subject: Re: [RFMRI] T1 to Fun coregistration problem (Error using DPARSFA_run&gt; (parfor body) (line 1477)
 

Hi Marouane,

Could you show a picture for the second checking?

Have you reoriented the images to approximate the template orientation?

Best,

Chao-Gan

Hi Chao-Gan,

Thank you for your replay, yes i did reorient my EPI and T1 very precisely as the template.

here is link with of one subject  (EPI ,T1 and QC for normalization). Note that i have skipped the slice timing and BET

https://drive.google.com/open?id=0B943xN-xSAGMWUFJZDItS3hJcTA

Looking forward for you comment. Thank you 



Best wishes
-----
Marouane
http://michael-meaney.lab.mcgill.ca/


From: RFMRI.ORG <rfmri.org-bounces@rnet.co> on behalf of The R-fMRI Network <rfmri.org@gmail.com>
Sent: Tuesday, October 18, 2016 12:43 AM
To: rfmri.org@rnet.co
Subject: Re: [RFMRI] T1 to Fun coregistration problem (Error using DPARSFA_run&gt; (parfor body) (line 1477)
 

Hi Chao-Gan,

Thank you for your replay, yes i did reorient my EPI and T1 very precisely as the template.

here is link with of one subject  (EPI ,T1 and QC for normalization). Note that i have skipped the slice timing and BET

https://drive.google.com/open?id=0B943xN-xSAGMWUFJZDItS3hJcTA

Looking forward for you comment. Thank you 

Best wishes

-----

Marouane

Hi 

Just to add to my previous comment, 5 subject out of my 20,  the normalization was fine, but for 15 subjects the normalization failed. all my subject look the same orientation before running normalization....any comment will be appreciated



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