ROI definition | The R-fMRI Network

Submitted by cxl298 on Tue, 10/29/2013 - 20:30

Re: [RFMRI] ROI definition

Hi Christian,

Currently, you can use (see https://github.com/Chaogan-Yan/DPARSF/blob/master/SubGUIs/DPARSF_ROI_Template.m)


ROICenter_AndrewsHanna=[-6 52 -2; -8 -56 26; 0 52 26; -54 -54 28; -60 -24 -18; -50 14 -40; 0 26 -18; -44 -74 32; -14 -52 8; -28 -40 -12; -22 -20 -26]; 


ROICenter=ROICenter_AndrewsHanna;


ROIRadius=5;
for iROI=1:size(ROICenter,1)
    ROIDef{iROI,1}=rest_SphereROI('ROIBall2Str', ROICenter(iROI,:), ROIRadius);
end


And then

Cfg.CalFC.ROIDef = ROIDef;

DPARSFA_run(Cfg);

It will be simplified in a future version.

Best,

Chao-Gan

On Tue, Oct 29, 2013 at 4:30 PM, The R-fMRI Network <rfmri.org@gmail.com> wrote:

[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]

By Christian La (cxl298)
Hi,

I want to import list of ROI definitions, but i'm unsure what the format of the files it needs to be.

Can somebody tell me how the text files for ROI definitions should looks like?

Thanks,

christian

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Hi,

I want to import list of ROI definitions, but i'm unsure what the format of the files it needs to be.

Can somebody tell me how the text files for ROI definitions should looks like?

Thanks,

christian