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Rest img mismatch after AFNI normalization

Submitted by marvelancet on Tue, 10/05/2010 - 16:12

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Hi everybody,

I'm currently processing a series of rest fmri data which need to be manually normalized.

The procedure briefly goes like this:

-- dparsf completed the pre-normalization steps from 'dicom->nifti' to 'realign'

-- toggle spm, 'coregister: estimate',

-- switch AFNI，

'3dWarp -deoblique' and '3drefit -markers ' to generate sturctural .HEAD/BRIK pair