/bin/sh: 1: /opt/conda/bin/fmriprep: not found

Submitted by puyunfashi on

I tried to preprocess brain imaging data from a GE scanner on a PC running Windows 11, and I get the following warning info:

DPABISurf: A Surface-Based Resting-State fMRI Data Analysis Toolbox. 
Release = V2.0_230110
Copyright(c) 2019; GNU GENERAL PUBLIC LICENSE
The R-fMRI Lab, Institute of Psychology, Chinese Academy of Sciences, 16 Lincui Road, Chaoyang District, Beijing 100101, China; Mail to Initiator:  YAN Chao-Gan
Programmers: YAN Chao-Gan; WANG Xin-Di; LU Bin
http://rfmri.org/dpabi
-----------------------------------------------------------
Citing Information:
DPABISurf is a surface-based resting-state fMRI data analysis toolbox evolved from DPABI/DPARSF, as easy-to-use as DPABI/DPARSF. DPABISurf is based on fMRIPrep (Esteban et al., 2019), FreeSurfer (Dale et al., 1999), ANTs (Avants et al., 2008), FSL (Jenkinson et al., 2002), AFNI (Cox, 1996), SPM (Ashburner, 2012), dcm2niix (Li et al., 2016), PALM (Winkler et al., 2016), GNU Parallel (Tange, 2011), MATLAB (The MathWorks Inc., Natick, MA, US), Docker (https://docker.com) and DPABI (Yan et al., 2016).
Reference: Yan, C.-G., Wang, X.-D., Lu, B. (2021). DPABISurf: data processing & analysis for brain imaging on surface. Science Bulletin, 66(24), 2453-2455, doi:https://doi.org/10.1016/j.scib.2021.09.016.
Warning: Support for ver('distcomp') will be removed in a future release.  Use ver('parallel') instead. 
> In ver>locGetSingleToolboxInfo (line 283)
In ver (line 56)
In DPABISurf_Pipeline
In gui_mainfcn (line 220)
In DPABISurf_Pipeline 
Warning: Support for ver('distcomp') will be removed in a future release.  Use ver('parallel') instead. 
> In ver>locGetSingleToolboxInfo (line 283)
In ver (line 56)
In DPABISurf_run (line 645)
In DPABISurf_Pipeline
In gui_mainfcn (line 95)
In DPABISurf_Pipeline
In matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPABISurf_Pipeline('pushbuttonDPABISurfRun_Callback',hObject,eventdata,guidata(hObject))

These subjects have not run fmriprep yet:
   {'sub-Pilot001'}

Warning: Support for ver('distcomp') will be removed in a future release.  Use ver('parallel') instead. 
> In ver>locGetSingleToolboxInfo (line 283)
In ver (line 56)
In y_ReRunfmriprepFailedSubjects (line 138)
In DPABISurf_run (line 797)
In DPABISurf_Pipeline
In gui_mainfcn (line 95)
In DPABISurf_Pipeline
In matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPABISurf_Pipeline('pushbuttonDPABISurfRun_Callback',hObject,eventdata,guidata(hObject)) 
Re-run the failed subjects with fmriprep, this process is very time consuming, please be patient...
/bin/sh: 1: /opt/conda/bin/fmriprep: not found

After re-run fmriprep, these subjects have not run fmriprep yet:
   {'sub-Pilot001'}

Error using DPABISurf_run
Error detected during running fmriprep, please check!

Error in DPABISurf_Pipeline

Error in gui_mainfcn (line 95)
       feval(varargin{:});

Error in DPABISurf_Pipeline

Error in matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPABISurf_Pipeline('pushbuttonDPABISurfRun_Callback',hObject,eventdata,guidata(hObject))

Error while evaluating UIControl Callback.

 

 

The reason for these info is that my DPABISurf version is outdated. And another reason is that I tried to use the hyper-V engine, which is also outdated. Please use the wsl engine.