Start doing preprocessing of rs-fMRI

Submitted by FaezeVedaei on

Hi 

I am beginner in using DPARSF. Just wanted to start doing preprocessing of resting-state data through advanced DPARSF, but saw that the session for uploading each subject's data does not working. I just gave the directory path but could not upload data. Can you please clarify me how I can do this step? 

 

Also, beside that I wanted to access to default mask provided by DPABI for ICC measurement on rs-fMRI. Can you please tell me if this is already available on the tool, is so how I can find that?

Thank you so much in advance for help.

Regards

Faeze

Dr. Chao-Gan
 
Thank you for your response. Regarding the setting up the directory, first of all I set the directory of data, but for upload the image, its section was not workable to upload data. Any idea?
Regarding the mask, I just tried using the item you introduced and used it in ICC measurement of 5 preprocessed rf-fMRI on 2 sessions. But I got the MATLAB error as I copied here. Can you please guide me what caused this error and how to resolve this ? Really appreciate your help.
 
Regards
Faeze
 
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
 
Array dimensions must match for binary array op.
 
Error in y_ICC_Image (line 20)
    Rate1Series = Rate1Series + Temp;
 
Error in DPABI_ICC_TOOL>ComputeButton_Callback (line 229)
        y_ICC_Image(ImgCells1, ImgCells2, OutputName, MaskFile);
 
Error in gui_mainfcn (line 95)
        feval(varargin{:});
 
Error in DPABI_ICC_TOOL (line 42)
    gui_mainfcn(gui_State, varargin{:});
 
Error in
matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPABI_ICC_TOOL('ComputeButton_Callback',hObject,eventdata,guidata(hObject)) 
Error while evaluating UIControl Callback.

Hi Dr. Chao-Gan

Thank you for helping me in the progress. Actually regarding the mask, I downloaded the .img file from the link you sent me and ran the ICC measurement, but again I got the same error as I copied here:

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

Array dimensions must match for binary array op.
 
Error in y_ICC_Image (line 20)
    Rate1Series = Rate1Series + Temp;
 
Error in DPABI_ICC_TOOL>ComputeButton_Callback (line 229)
        y_ICC_Image(ImgCells1, ImgCells2, OutputName, MaskFile);
 
Error in gui_mainfcn (line 95)
        feval(varargin{:});
 
Error in DPABI_ICC_TOOL (line 42)
    gui_mainfcn(gui_State, varargin{:});
 
Error in
matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPABI_ICC_TOOL('ComputeButton_Callback',hObject,eventdata,guidata(hObject)) 
Error while evaluating UIControl Callback.
 
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
 
Can you please help me how I can resolve this issue? Thank you very much.
 
Regards
Faeze
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