DPABI/DPABISurf/DPARSF

Hi,

Using dpabi, I have successfully pre-processed all subjects in ADNI that include both "resting_state_fMRI" and "MPRAGE SENSE 2" files.

It seems to me that only 770 subjects in ADNI have resting_state_fMRI data.

My question is: are fMRI data always needed to run the pre-processing with dpabi (as I have already done) or is there also a different way that does not require fMRI data?

Thanks,

Dimitris

hi there,

i've preprocessed my data using the standard fmriprep pipeline (not within dpabiSURF). I'm wondering it its possible to run dpabiSURF on the fmriprep processed data to denoise and construct the functional connectome matrices?

Dear Dr.Yan,

严老师好，各位老师好，最近用dpabi做Dynamic Analyses，然后结果文件夹里面每个指标的结果都有3种前缀，分别是CV，Mean和Std，想咨询一下这3种前缀的结果文件分别是什么意思，我应该用哪个结果进行组间差异的统计分析呢？

Hi, Dr. Yan, 

While I used the DPABI_Utilities to extract values from the preprocessed images (gifti/nifti), an error as following occured. I tried to debug including: 1) change the version of dpabi; 2)  runs on other computers; 3) change the other atlas; 4) re-set matlab path, however, the error still occured.

For nifti data:

Hi, Dr. Yan, 

In these 2 days I've encountered several problems using DPARSF 5.2, expecially with the Preprocessing for Task fMRI data, and I'd like to ask you some suggestions to fix the anomalies. In particular, the error starts when I try to open the window to set up the preprocessing, it crashes immediately, showing in the command window these errors:

"Operands to the logical and (&&) and or (||) operators must be convertible to logical scalar values.

Hi, Dr. Yan,

When I run the subjects in DPABISurf, there are two subjects cannot be processed at the fmriprep while others can? Could you please have a look and give me some suggestions on how to deal with it? Attached please find the error info and the file. Thank you for your expended time in advance!

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Dear DPABI team,

I try to create the 90% EPI coverage mask using the respective function in quality control. I preprocessed the data using DPABIsurf pipeline and fMRIprep. 

I keep getting the error message 

Reading images from "/Users/julian/Documents/Research/DPABI_Surf_neworder/Masks/AutoMasks/wAutoMask_Sub_001.nii" etc.

Error using y_Read (line 54)

各位老师好：

最近刚开始接触DPABISurf和Docker，我想请教Linux下一个关于Docker运行结果的所有者的问题。

首先，按照下面的方法，在Linux上让管理员用root账户配置了我的账号：

# 添加 docker 用户组

sudo groupadd docker

# 把需要执行的 docker 用户添加进该组，这里是 ABC

sudo gpasswd -a ABC docker

# 重启 docker