DPABI/DPABISurf/DPARSF

Hi All,

I just wanted to share my experience about an error I got in DPARSF in case anyone else comes across it or in case the DPARSF creators want to fix this in future versions.

I have been running DPARSF jobs and they seem to fail a portion of the time somewhere after the initiation of the BET step.

Before this step, DPARSF requires user input (in my batch at least) saying "No co* images found" or something along those lines.

Dear Yan,

Although I am still learning, I am very happy with your software for the resting state analyses.

However, I have a doubt. I performed the FC analyes considering the ROI1. Then, I used SPM to compare two groups G1 and G2. At the whole brain, I obtain a significative difference between the two groups in the cluster C1.

In DPARSF, "Extract ROI time courses" can extract the ROI time courses from the defined ROIs, as stored in: ROISignals in {WorkingDir}/Results/ROISignals_FunImgARCWF/ROISignals_Sub_001.mat

"Functional Connectivity" analysis can also extract the ROI time courses, as stored in: SeedSeries in {WorkingDir}/Results/FC_FunImgARCWF/ROI_FCMap_Sub_001.mat

Dear Dr. Chao-Gan Yan,

Dear All,

Dear Yan,

   When I used DPABI viewer, I had one question about the lateral issues. As you mentioned in the Multimedia Course, the left of picture is actully the right hemisphere, as we known in the clinical practice. However, the atlas in DPABI viewer present the opposite result. In another word, the left picture was shown to be the left hemisphere, as illustrated in the attachment. This bothers me a lot. 

   Please help me out. Thank you so much.

   Best,

  Mia

I am running DPABI version 2.3 and using the DPARSF 4.3 (Advanced Edition) installed with Matlab2016b on MAC OS.

Though I only choosed the EPI2NII item, I got the following error when trying to run the attached batch:

Hi,

I am running DPABI version 2.3 and using the DPARSF 4.3 (Advanced Edition) installed.

I am using Matlab 2014b on a linux machine and got the following error when trying to run the attached batch:

Hello All,

I am using DPARSF to process my resting state data which will primarily be used in seed to whole brain analyses .

I have about 15 subjects that have been scanned before/after an intervention.

12 of those subjects have two resting state scans for each visit, but three of the subjects only have one scan for one of their visits.

What is the best way to handle this in DPABI?

What I have currently been doing is splitting all the data up so that each run is thought of as a different subject.