DPABI/DPABISurf/DPARSF

y READ error, file doesn't exist

Submitted by aminuj on

So I have been having major issue with this, I want to run a dartel normalisation, smooth, detrend etc... but i keep getting an error message when I reach the coreg part of T1 and Fun. 
If you look at the picture i attached you will see my parameters. I'm sure i have all the files laid out as the programme instructs.

thanks for your help.

Do I have to start all over again if the pre-processing is interrupted?

Submitted by dtelt on

Hello Guys,

I am trying to do the pre-processing of data, but it stopped after generating folder "Reorient mats". It stopped because I clicked on "Define ROI" in the same tab as "QC score tab". it gave the error as follows:

 Moving Head Motion Corrected Files:Sub_002 OK

unable launch the DPABI under Linux

Submitted by daozhe on

hi,

    when I use the matlab under Linux system, once I tyoe "dpabi", the matlab will be jamed and the other previously launched procedure, such as REST, also could not   continue to use.  The matlab was like dead and I can do nothing. When 25 mins later, the dpabi gui was shown up. However, when I further clicked the "viewer" or other button, there was an error appearing:"undefined function or variable ‘DPABI_VIEW'". 

   I have reset my Matlab14a, but this problems was still existed. What should I do?  

mask does not matcȟ error (Y Extract ROISignal)

Submitted by aminuj on

Hi everone so i'm faced with a mask size error. I require a size of 64x64x48. But the default mask provided by DPARSF appears to 80x80x48. Also when I input 'no mask' I get this error.
1. How do I get a mask that is 64x64x48.
2. If I build a ROI using the program Marsbar how do I use it in DPARSF and do I have to do any processing for it to work on DPARSF.
**look at attached image please.

Any advice is appreciated, thank.

How can we skip the pre-processing step? how to calculate FC between all pairs of the different ROI's of the AAL template?

Submitted by dtelt on

Hello Guys,

I have couple of questions regarding DPARSF, to understand I used the demo data dor DPARSF, the questions are as follows:

how can we skip the Pre-processing step once it was already done?  I’m interested in repeating the FC calculations without repeating the extensive and cumbersome preprocessing, which can be done only once.

add colour bar error (y spm orthviews)

Submitted by aminuj on

hey guys, I am looking to do a FC analysis of my data set, 2 groups healthy and mild alzheimers.
However  when processing with DPARSF, i get an error after the normalise: estimate and write part,
The essor appears is something to do with a colour bar, i'm not exaclty sure how it wants me to 'add the colour bar'.

If anyone has had past experieneces with this please help me, I have looked through the forum and no one has really explained/answered how to fix this issue. This issue has been very frustrating and i'm wasting a lot of time trying to fix it.

Bet: command not found

Submitted by heretic133 on

hey everybody,

I am trying to extract the ROI signals for a lot of objects, I used DPARSF to do so, now that I am almost finished with the preprocessing steps, I found out that since I am working in ubuntu, I had to install FSL. The preprocessing took several days to complete for me, and I need to know if my results are accurate or if I should install FSL and run the preprocessing steps again.
Thank you very much for your time.