Error using y_FD_Jenkinson

Submitted by Anonymous (not verified) on

 

I am trying to use DPARSF-A and have received the following error.  It seems to occur after registration. I assume this is related to the head movement nuisance covariate regression?  I thought it might be related to the type of regession I chose, but I tried with Rigid-body-6 and Friston-24 and received the same error:
 
??? Error using ==> y_FD_Jenkinson
Too many input arguments.
Error in ==> DPARSFA_run at 858
            FD_Jenkinson = y_FD_Jenkinson(rpname.name,RefFile);
Error in ==> DPARSFA>pushbuttonRun_Callback at 1601
    [Error]=DPARSFA_run(handles.Cfg);
Error in ==> gui_mainfcn at 96
        feval(varargin{:});
Error in ==> DPARSFA at 33
    gui_mainfcn(gui_State, varargin{:});
??? Error while evaluating uicontrol Callback
 
Thank You

YAN Chao-Gan

Thu, 10/17/2013 - 19:00

Permalink

Hi Michael,
It's not clear which caused this error. I guess that there could be something wrong with realignment or your data organization.

Could you paste a snapshot of your parameter setting in DPARSFA?

Best,

Chao-Gan


On Thu, Oct 17, 2013 at 6:25 AM, The R-fMRI Network <rfmri.org@gmail.com> wrote:
[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]

By Michael Dimyan (mdimyan)

 

I am trying to use DPARSF-A and have received the following error.  It seems to occur after registration. I assume this is related to the head movement nuisance covariate regression?  I thought it might be related to the type of regession I chose, but I tried with Rigid-body-6 and Friston-24 and received the same error:
 
??? Error using ==> y_FD_Jenkinson
Too many input arguments.
Error in ==> DPARSFA_run at 858
            FD_Jenkinson = y_FD_Jenkinson(rpname.name,RefFile);
Error in ==> DPARSFA>pushbuttonRun_Callback at 1601
    [Error]=DPARSFA_run(handles.Cfg);
Error in ==> gui_mainfcn at 96
        feval(varargin{:});
Error in ==> DPARSFA at 33
    gui_mainfcn(gui_State, varargin{:});
??? Error while evaluating uicontrol Callback
 
Thank You

Online version of this post: http://www.rfmri.org/content/error-using-yfdjenkinson


mdimyan (not verified)

Thu, 10/17/2013 - 20:40

Permalink

I saved the settings as a .mat -- is this useful?

The data is organized in this manner:

Analysis Folder

     FunImg

          Subject001

               Subject001restingfmri.nii

          Subject002

               Subject002restingfmri.nii

     T1Img

          Subject001

               Subject001mprage.nii

          Subject002

               Subject002mprage.nii


It looks like the FunImgR, FunImgA, FunImgAR, And RealignParameters are all being made correctly as far as I can tell.  I've also attached the FD_Jenkinson*.txt files if those are helpful.



>>>


[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]


Commented by YAN Chao-Gan (YAN Chao-Gan)

Hi Michael,


It's not clear which caused this error. I guess that there could be something wrong with realignment or your data organization.


Could you paste a snapshot of your parameter setting in DPARSFA?


Best,


Chao-Gan



On Thu, Oct 17, 2013 at 6:25 AM, The R-fMRI Network <rfmri.org@gmail.com> wrote:

[To post a comment, please reply to rfmri.org@gmail.com ABOVE this line]


By Michael Dimyan (mdimyan)

 

I am trying to use DPARSF-A and have received the following error.  It seems to occur after registration. I assume this is related to the head movement nuisance covariate regression?  I thought it might be related to the type of regession I chose, but I tried with Rigid-body-6 and Friston-24 and received the same error:

 

??? Error using ==> y_FD_Jenkinson

Too many input arguments.

Error in ==> DPARSFA_run at 858

            FD_Jenkinson = y_FD_Jenkinson(rpname.name,RefFile);

Error in ==> DPARSFA>pushbuttonRun_Callback at 1601

    [Error]=DPARSFA_run(handles.Cfg);

Error in ==> gui_mainfcn at 96

        feval(varargin{:});

Error in ==> DPARSFA at 33

    gui_mainfcn(gui_State, varargin{:});

??? Error while evaluating uicontrol Callback

 

Thank You


Online version of this post: http://www.rfmri.org/content/error-using-yfdjenkinson




Online version of this post: http://www.rfmri.org/comment/2906#comment-2906




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