Node: qsirecon_wf.sub-sub001_mrtrix_singleshell_ss3_hsvst.sub_sub001_space_T1w_desc_preproc_recon_wf.ss3t_csd.estimate_fod
Working directory: /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/ss3t_csd/estimate_fod

Node inputs:

algorithm = ss3t
args = <undefined>
bval_scale = <undefined>
csf_odf = <undefined>
csf_txt = <undefined>
environ = {}
gm_odf = <undefined>
gm_txt = <undefined>
grad_file = <undefined>
grad_fsl = <undefined>
in_bval = <undefined>
in_bvec = <undefined>
in_dirs = <undefined>
in_file = <undefined>
mask_file = <undefined>
max_sh = <undefined>
nthreads = 8
out_bval = <undefined>
out_bvec = <undefined>
shell = <undefined>
wm_odf = <undefined>
wm_txt = <undefined>

Traceback (most recent call last):
  File "/usr/local/miniconda/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
    result["result"] = node.run(updatehash=updatehash)
  File "/usr/local/miniconda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run
    result = self._run_interface(execute=True)
  File "/usr/local/miniconda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface
    return self._run_command(execute)
  File "/usr/local/miniconda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command
    raise NodeExecutionError(msg)
nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node estimate_fod.

Cmdline:
	/opt/3Tissue/bin/ss3t_csd_beta1 -mask /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/resample_mask/sub-sub001_desc-brain_mask_resample.nii.gz -nthreads 8 /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/ss3t_csd/create_mif/sub-sub001_space-T1w_desc-preproc_dwi.mif /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/ss3t_csd/estimate_response/sub-sub001_space-T1w_desc-preproc_dwi_wm.txt sub-sub001_space-T1w_desc-preproc_dwi_wm.mif /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/ss3t_csd/estimate_response/sub-sub001_space-T1w_desc-preproc_dwi_gm.txt sub-sub001_space-T1w_desc-preproc_dwi_gm.mif /data/qsireconwork/sub-sub001/qsirecon_wf/sub-sub001_mrtrix_singleshell_ss3_hsvst/sub_sub001_space_T1w_desc_preproc_recon_wf/ss3t_csd/estimate_response/sub-sub001_space-T1w_desc-preproc_dwi_csf.txt sub-sub001_space-T1w_desc-preproc_dwi_csf.mif
Stdout:

Stderr:
	ss3t_csd_beta1: 
	ss3t_csd_beta1: Note that this script makes use of commands / algorithms that have relevant articles for citation. Please consult the help page (-help option) for more information.
	ss3t_csd_beta1: 
	ss3t_csd_beta1: -------
	ss3t_csd_beta1: 4 unique b-value(s) detected: 0,1000,2000,3000 with 1,20,30,40 volumes

	ss3t_csd_beta1: [ERROR] Need b=0 data and a single non b=0 shell.
Traceback:
	RuntimeError: subprocess exited with code 1.